Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9726 to 9750 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2515597
2515609
AGGCGC
12
-
2
CTGCGC
UKMR15_RS27740
2514767
2516443
-
Genic
-830
NZ_LR595897.1
2516153
2516167
AAGCCG
14
-
2
GCTTCG
UKMR15_RS27740
2514767
2516443
-
Genic
-1386
NZ_LR595897.1
2516850
2516862
ACGGCG
12
-
2
GCCGTC
UKMR15_RS27745
2516614
2517711
-
Genic
-236
NZ_LR595897.1
2517127
2517142
AGCGCG
15
+
2
GCGAGC
UKMR15_RS27745
2516614
2517711
-
Genic
-513
NZ_LR595897.1
2518759
2518782
AGCCCG
23
-
3
GCTCGG
UKMR15_RS27760
2518581
2518868
+
Genic
-178
NZ_LR595897.1
2519583
2519596
AGGCCG
13
-
2
GCCTCG
UKMR15_RS27770
2519148
2520581
-
Genic
-435
NZ_LR595897.1
2522643
2522655
AGATCG
12
+
2
AGATCG
UKMR15_RS27780
2522610
2524190
-
Genic
-33
NZ_LR595897.1
2522763
2522776
AGCGCG
13
-
2
TCGCGC
UKMR15_RS27780
2522610
2524190
-
Genic
-153
NZ_LR595897.1
2523231
2523243
ACGCG
12
+
2
CGCGA
UKMR15_RS27780
2522610
2524190
-
Genic
-621
NZ_LR595897.1
2523616
2523628
ACGCCG
12
+
2
CGCCGA
UKMR15_RS27780
2522610
2524190
-
Genic
-1006
NZ_LR595897.1
2524329
2524341
CCG
12
-
4
GCG
UKMR15_RS27785
2524390
2525676
-
Intergenic
49
NZ_LR595897.1
2524344
2524356
CCG
12
-
4
GCG
UKMR15_RS27785
2524390
2525676
-
Intergenic
34
NZ_LR595897.1
2524369
2524381
CCG
12
-
4
GCG
UKMR15_RS27785
2524390
2525676
-
Intergenic
9
NZ_LR595897.1
2524438
2524451
AGCCCG
13
+
2
AGCCCG
UKMR15_RS27785
2524390
2525676
-
Genic
-48
NZ_LR595897.1
2524790
2524802
ACGGCG
12
-
2
CGTCGC
UKMR15_RS27785
2524390
2525676
-
Genic
-400
NZ_LR595897.1
2525620
2525632
AGCGCG
12
+
2
AGCGCG
UKMR15_RS27785
2524390
2525676
-
Genic
-1230
NZ_LR595897.1
2525897
2525909
CCGCGG
12
+
2
GCCGCG
UKMR15_RS27790
2525717
2525971
-
Genic
-180
NZ_LR595897.1
2526509
2526521
AGCGCG
12
-
2
GCGCTC
UKMR15_RS27800
2526420
2528072
+
Genic
-89
NZ_LR595897.1
2526807
2526821
ACGCGC
14
-
2
GCGTGC
UKMR15_RS27800
2526420
2528072
+
Genic
-387
NZ_LR595897.1
2527688
2527700
AGCGCG
12
-
2
TCGCGC
UKMR15_RS27800
2526420
2528072
+
Genic
-1268
NZ_LR595897.1
2527925
2527937
CCCGCG
12
-
2
GGCGCG
UKMR15_RS27800
2526420
2528072
+
Genic
-1505
NZ_LR595897.1
2528331
2528344
AGCGCG
13
+
2
AGCGCG
UKMR15_RS27805
2528139
2528555
-
Genic
-192
NZ_LR595897.1
2528368
2528381
CCGCGG
13
+
2
CGGCCG
UKMR15_RS27805
2528139
2528555
-
Genic
-229
NZ_LR595897.1
2529226
2529238
ACGTCG
12
+
2
CGTCGA
UKMR15_RS27810
2528760
2530001
-
Genic
-466
NZ_LR595897.1
2529344
2529356
CCGCG
12
-
2
CGCGG
UKMR15_RS27810
2528760
2530001
-
Genic
-584