Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9776 to 9800 repeats of 10659
Go To:
<<
<
390
391
392
393
394
>
>>
Clear Filters
Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2544979
2544991
AACGCG
12
+
2
AACGCG
UKMR15_RS27885
2544688
2545635
-
Genic
-291
NZ_LR595897.1
2545098
2545110
CCGCG
12
+
2
GCCGC
UKMR15_RS27885
2544688
2545635
-
Genic
-410
NZ_LR595897.1
2546460
2546473
CCGCG
13
-
2
CGCGG
UKMR15_RS27890
2545691
2546728
+
Genic
-769
NZ_LR595897.1
2546704
2546716
CCGCG
12
+
2
CGCGC
UKMR15_RS27890
2545691
2546728
+
Genic
-1013
NZ_LR595897.1
2547781
2547794
ACCGCG
13
+
2
CCGCGA
UKMR15_RS27895
2546907
2547821
-
Genic
-874
NZ_LR595897.1
2547965
2547979
CCGCG
14
-
2
GCGCG
benA
2548045
2549412
+
Intergenic
66
NZ_LR595897.1
2548231
2548243
AACGCG
12
+
2
CGAACG
benA
2548045
2549412
+
Genic
-186
NZ_LR595897.1
2548656
2548668
ACACGT
12
+
2
ACGTAC
benA
2548045
2549412
+
Genic
-611
NZ_LR595897.1
2549105
2549117
CG
12
+
6
CG
benA
2548045
2549412
+
Genic
-1060
NZ_LR595897.1
2550322
2550334
ACGTCG
12
+
2
TCGACG
UKMR15_RS27910
2549944
2550963
+
Genic
-378
NZ_LR595897.1
2551371
2551383
CCG
12
-
4
GCG
UKMR15_RS27915
2550960
2551754
+
Genic
-411
NZ_LR595897.1
2551809
2551824
CCGCG
15
-
3
GCGCG
UKMR15_RS27920
2551798
2552799
-
Genic
-11
NZ_LR595897.1
2551989
2552001
ACGCG
12
-
2
CGTCG
UKMR15_RS27920
2551798
2552799
-
Genic
-191
NZ_LR595897.1
2552305
2552317
CCGCGG
12
+
2
GCCGCG
UKMR15_RS27920
2551798
2552799
-
Genic
-507
NZ_LR595897.1
2552527
2552539
CCGCG
12
-
2
GCGCG
UKMR15_RS27920
2551798
2552799
-
Genic
-729
NZ_LR595897.1
2552924
2552936
AACGCG
12
+
2
CGAACG
UKMR15_RS27925
2552740
2552877
+
Intergenic
-184
NZ_LR595897.1
2554016
2554029
ACGAGC
13
-
2
GTGCTC
UKMR15_RS27935
2553561
2554133
+
Genic
-455
NZ_LR595897.1
2554312
2554325
ATCGCG
13
+
2
CGATCG
UKMR15_RS27940
2554156
2555208
+
Genic
-156
NZ_LR595897.1
2554392
2554404
ACAGCG
12
-
2
CTGTCG
UKMR15_RS27940
2554156
2555208
+
Genic
-236
NZ_LR595897.1
2554545
2554557
CCG
12
+
4
GCC
UKMR15_RS27940
2554156
2555208
+
Genic
-389
NZ_LR595897.1
2554740
2554752
ACCGCG
12
-
2
GTCGCG
UKMR15_RS27940
2554156
2555208
+
Genic
-584
NZ_LR595897.1
2555921
2555936
CCGCGG
15
+
2
GCCGCG
UKMR15_RS27950
2555880
2557319
+
Genic
-41
NZ_LR595897.1
2557384
2557398
AACGC
14
+
2
ACGCA
UKMR15_RS27950
2555880
2557319
+
Intergenic
-1504
NZ_LR595897.1
2557663
2557675
ACATGG
12
-
2
ATGTCC
UKMR15_RS27955
2557567
2559129
-
Genic
-96
NZ_LR595897.1
2557833
2557845
AACGCG
12
+
2
CGCGAA
UKMR15_RS27955
2557567
2559129
-
Genic
-266