Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9751 to 9775 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2529408
2529421
AGCGCG
13
+
2
AGCGCG
UKMR15_RS27810
2528760
2530001
-
Genic
-648
NZ_LR595897.1
2529457
2529469
CCGCG
12
-
2
GGCGC
UKMR15_RS27810
2528760
2530001
-
Genic
-697
NZ_LR595897.1
2529921
2529933
AGCGCG
12
-
2
TCGCGC
UKMR15_RS27810
2528760
2530001
-
Genic
-1161
NZ_LR595897.1
2532676
2532688
ACGTCG
12
+
2
TCGACG
UKMR15_RS27830
2532343
2533347
+
Genic
-333
NZ_LR595897.1
2532804
2532816
CCG
12
-
4
GCG
UKMR15_RS27830
2532343
2533347
+
Genic
-461
NZ_LR595897.1
2534498
2534512
ACGAGC
14
-
2
GCTCGT
UKMR15_RS27840
2534395
2535528
+
Genic
-103
NZ_LR595897.1
2534740
2534752
ACGCGC
12
+
2
ACGCGC
UKMR15_RS27840
2534395
2535528
+
Genic
-345
NZ_LR595897.1
2535175
2535187
AGCGCG
12
-
2
TCGCGC
UKMR15_RS27840
2534395
2535528
+
Genic
-780
NZ_LR595897.1
2535807
2535819
AAGCCG
12
+
2
CGAAGC
catA
2535563
2536465
+
Genic
-244
NZ_LR595897.1
2536288
2536300
AACGCG
12
-
2
TTCGCG
catA
2535563
2536465
+
Genic
-725
NZ_LR595897.1
2536796
2536808
CCGCG
12
-
2
GCGCG
catC
2536503
2536793
+
Intergenic
-293
NZ_LR595897.1
2536892
2536904
CCCGCG
12
-
2
GGCGCG
cyoD
2536913
2537245
-
Intergenic
9
NZ_LR595897.1
2537462
2537475
AGCGC
13
-
2
GCGCT
cyoC
2537246
2537854
-
Genic
-216
NZ_LR595897.1
2538131
2538149
ATCGGC
18
-
3
TGCCGA
cyoB
2537854
2539866
-
Genic
-277
NZ_LR595897.1
2538489
2538502
AACCAG
13
+
2
CCAGAA
cyoB
2537854
2539866
-
Genic
-635
NZ_LR595897.1
2538993
2539005
AGGATC
12
+
2
CAGGAT
cyoB
2537854
2539866
-
Genic
-1139
NZ_LR595897.1
2539307
2539320
ACGCCG
13
+
2
CGACGC
cyoB
2537854
2539866
-
Genic
-1453
NZ_LR595897.1
2539518
2539530
ATCGCC
12
+
2
CGCCAT
cyoB
2537854
2539866
-
Genic
-1664
NZ_LR595897.1
2539608
2539621
AGCGCG
13
+
2
CGCGAG
cyoB
2537854
2539866
-
Genic
-1754
NZ_LR595897.1
2539800
2539813
CCCGCG
13
+
2
CGCGCC
cyoB
2537854
2539866
-
Genic
-1946
NZ_LR595897.1
2541328
2541340
CCGCG
12
+
2
CCGCG
UKMR15_RS27875
2541499
2543532
-
Intergenic
159
NZ_LR595897.1
2541480
2541492
CCCCG
12
+
2
CCCCG
UKMR15_RS27875
2541499
2543532
-
Intergenic
7
NZ_LR595897.1
2542367
2542379
CCGG
12
+
3
GGCC
UKMR15_RS27875
2541499
2543532
-
Genic
-868
NZ_LR595897.1
2543928
2543942
AGCCGC
14
-
2
GGCTGC
UKMR15_RS27880
2543682
2544734
+
Genic
-246
NZ_LR595897.1
2544322
2544334
AGCGGC
12
-
2
GCCGCT
UKMR15_RS27880
2543682
2544734
+
Genic
-640