Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9676 to 9700 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2487594
2487606
AAAAGG
12
+
2
AAGGAA
UKMR15_RS27630
2487607
2488296
-
Intergenic
1
NZ_LR595897.1
2487693
2487705
ATCCGG
12
+
2
GATCCG
UKMR15_RS27630
2487607
2488296
-
Genic
-86
NZ_LR595897.1
2487970
2487982
AGGCCG
12
-
2
TCGGCC
UKMR15_RS27630
2487607
2488296
-
Genic
-363
NZ_LR595897.1
2488068
2488081
AGCGCG
13
+
2
CGCGAG
UKMR15_RS27630
2487607
2488296
-
Genic
-461
NZ_LR595897.1
2489464
2489476
ACGCGT
12
+
2
CGCGTA
UKMR15_RS27640
2489366
2490598
-
Genic
-98
NZ_LR595897.1
2489519
2489531
AGATCC
12
-
2
TGGATC
UKMR15_RS27640
2489366
2490598
-
Genic
-153
NZ_LR595897.1
2490427
2490440
AAGGCG
13
-
2
CGCCTT
UKMR15_RS27640
2489366
2490598
-
Genic
-1061
NZ_LR595897.1
2491393
2491405
AGATCG
12
-
2
ATCTCG
UKMR15_RS27645
2490955
2491881
+
Genic
-438
NZ_LR595897.1
2492378
2492390
CCG
12
-
4
GCG
UKMR15_RS27650
2491973
2492374
+
Intergenic
-405
NZ_LR595897.1
2495723
2495737
CCGCG
14
+
2
GCGCC
UKMR15_RS27660
2494591
2495472
-
Intergenic
-1132
NZ_LR595897.1
2498141
2498155
ATCGCC
14
-
2
GGCGAT
UKMR15_RS27665
2496154
2498163
+
Genic
-1987
NZ_LR595897.1
2499619
2499631
CCGCG
12
-
2
CGGCG
UKMR15_RS27675
2499234
2500343
+
Genic
-385
NZ_LR595897.1
2499875
2499891
AGCGCG
16
-
2
CTCGCG
UKMR15_RS27675
2499234
2500343
+
Genic
-641
NZ_LR595897.1
2500365
2500415
AACGCC
50
-
8
GCGTTG
UKMR15_RS27675
2499234
2500343
+
Intergenic
-1131
NZ_LR595897.1
2500411
2500434
ACTGGC
23
+
3
TGGCAC
UKMR15_RS27675
2499234
2500343
+
Intergenic
-1177
NZ_LR595897.1
2500441
2500469
AATGCC
28
-
4
TGGCAT
UKMR15_RS27675
2499234
2500343
+
Intergenic
-1207
NZ_LR595897.1
2500466
2500527
AAGCCG
61
-
10
GGCTTC
UKMR15_RS27675
2499234
2500343
+
Intergenic
-1232
NZ_LR595897.1
2502420
2502433
AACGAC
13
+
2
ACAACG
UKMR15_RS27690
2502400
2503071
+
Genic
-20
NZ_LR595897.1
2503363
2503377
AAGCCG
14
+
2
GCCGAA
UKMR15_RS27695
2503178
2503591
-
Genic
-185
NZ_LR595897.1
2503421
2503435
ACGCCG
14
+
2
CCGACG
UKMR15_RS27695
2503178
2503591
-
Genic
-243
NZ_LR595897.1
2503555
2503568
CCGCG
13
-
2
GCGCG
UKMR15_RS27695
2503178
2503591
-
Genic
-377
NZ_LR595897.1
2505056
2505068
CCGCG
12
+
2
CGCCG
UKMR15_RS27705
2505072
2506355
-
Intergenic
4
NZ_LR595897.1
2505506
2505518
AGGCCG
12
+
2
GCCGAG
UKMR15_RS27705
2505072
2506355
-
Genic
-434
NZ_LR595897.1
2506044
2506056
ACGAGC
12
+
2
ACGAGC
UKMR15_RS27705
2505072
2506355
-
Genic
-972
NZ_LR595897.1
2506715
2506727
CCCCCG
12
+
2
CCCGCC
UKMR15_RS27710
2506741
2507463
-
Intergenic
14