Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9626 to 9650 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2458053
2458065
AGCGCG
12
-
2
GCTCGC
UKMR15_RS27500
2456450
2458669
-
Genic
-1603
NZ_LR595897.1
2458132
2458145
ACGCTC
13
-
2
CGTGAG
UKMR15_RS27500
2456450
2458669
-
Genic
-1682
NZ_LR595897.1
2458420
2458435
ACGCAG
15
-
2
CGTCTG
UKMR15_RS27500
2456450
2458669
-
Genic
-1970
NZ_LR595897.1
2458530
2458542
ACCACG
12
+
2
CGACCA
UKMR15_RS27500
2456450
2458669
-
Genic
-2080
NZ_LR595897.1
2458679
2458691
AACCTC
12
-
2
TTGAGG
UKMR15_RS27500
2456450
2458669
-
Intergenic
-2229
NZ_LR595897.1
2459852
2459864
ACGGCG
12
+
2
CGGCGA
UKMR15_RS27505
2458720
2459895
-
Genic
-1132
NZ_LR595897.1
2460185
2460198
ACGGCG
13
-
2
GCCGTC
UKMR15_RS27510
2459889
2460323
-
Genic
-296
NZ_LR595897.1
2460567
2460580
ACGCGG
13
-
2
CGCGTC
UKMR15_RS27515
2460346
2461767
-
Genic
-221
NZ_LR595897.1
2462060
2462072
CCCGCG
12
-
2
GCGGGC
UKMR15_RS27520
2461813
2463195
-
Genic
-247
NZ_LR595897.1
2463430
2463443
CCGCG
13
-
2
CGCGG
UKMR15_RS27525
2463625
2465145
+
Intergenic
182
NZ_LR595897.1
2464690
2464702
ACG
12
-
4
TCG
UKMR15_RS27525
2463625
2465145
+
Genic
-1065
NZ_LR595897.1
2465923
2465935
CCG
12
-
4
GGC
UKMR15_RS27530
2465218
2466222
-
Genic
-705
NZ_LR595897.1
2466286
2466298
ACGGCC
12
+
2
CGGCCA
UKMR15_RS27530
2465218
2466222
-
Intergenic
-1068
NZ_LR595897.1
2467088
2467100
AAAACG
12
-
2
TTTCGT
UKMR15_RS27535
2466799
2467380
-
Genic
-289
NZ_LR595897.1
2467643
2467655
AAGGTG
12
-
2
ACCTTC
UKMR15_RS27540
2467406
2468743
-
Genic
-237
NZ_LR595897.1
2468179
2468191
CCGCG
12
-
2
GCGCG
UKMR15_RS27540
2467406
2468743
-
Genic
-773
NZ_LR595897.1
2468549
2468561
ACCGAG
12
-
2
GTCTCG
UKMR15_RS27540
2467406
2468743
-
Genic
-1143
NZ_LR595897.1
2468837
2468849
CG
12
+
6
GC
UKMR15_RS27545
2468855
2469277
-
Intergenic
6
NZ_LR595897.1
2469303
2469315
CCGCG
12
+
2
CGCGC
UKMR15_RS27545
2468855
2469277
-
Intergenic
-448
NZ_LR595897.1
2469557
2469569
CCCGCG
12
-
2
GGCGCG
UKMR15_RS27550
2469548
2470582
-
Genic
-9
NZ_LR595897.1
2469875
2469888
AGGCGG
13
-
2
GCCTCC
UKMR15_RS27550
2469548
2470582
-
Genic
-327
NZ_LR595897.1
2470060
2470073
ACGGAT
13
+
2
CGGATA
UKMR15_RS27550
2469548
2470582
-
Genic
-512
NZ_LR595897.1
2470436
2470448
ACGCGC
12
-
2
TGCGCG
UKMR15_RS27550
2469548
2470582
-
Genic
-888
NZ_LR595897.1
2470461
2470475
ACGGCG
14
-
2
CGTCGC
UKMR15_RS27550
2469548
2470582
-
Genic
-913
NZ_LR595897.1
2470489
2470502
AGCATC
13
+
2
CAGCAT
UKMR15_RS27550
2469548
2470582
-
Genic
-941