Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9576 to 9600 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2422774
2422787
ACATCG
13
+
2
CATCGA
UKMR15_RS27315
2421621
2422961
+
Genic
-1153
NZ_LR595897.1
2422911
2422923
ACGAGC
12
-
2
TCGTGC
UKMR15_RS27315
2421621
2422961
+
Genic
-1290
NZ_LR595897.1
2423244
2423258
AGCGCG
14
-
2
CGCGCT
UKMR15_RS27320
2422958
2423587
+
Genic
-286
NZ_LR595897.1
2423977
2423989
ACGGCG
12
-
2
TCGCCG
UKMR15_RS27325
2423746
2425389
-
Genic
-231
NZ_LR595897.1
2424047
2424061
CCGCG
14
-
2
CGGCG
UKMR15_RS27325
2423746
2425389
-
Genic
-301
NZ_LR595897.1
2424374
2424386
ACGGCG
12
-
2
CGCCGT
UKMR15_RS27325
2423746
2425389
-
Genic
-628
NZ_LR595897.1
2424671
2424683
AGCGCG
12
+
2
CGAGCG
UKMR15_RS27325
2423746
2425389
-
Genic
-925
NZ_LR595897.1
2425241
2425253
AGCGCG
12
+
2
CGAGCG
UKMR15_RS27325
2423746
2425389
-
Genic
-1495
NZ_LR595897.1
2425829
2425842
CCCGCG
13
-
2
GCGGGC
UKMR15_RS27330
2425665
2426378
+
Genic
-164
NZ_LR595897.1
2427504
2427516
AGCGCC
12
+
2
AGCGCC
UKMR15_RS27340
2427246
2428484
-
Genic
-258
NZ_LR595897.1
2428060
2428073
ATCGCG
13
+
2
GATCGC
UKMR15_RS27340
2427246
2428484
-
Genic
-814
NZ_LR595897.1
2430121
2430133
ATCCG
12
-
2
TCGGA
UKMR15_RS27355
2430078
2430932
+
Genic
-43
NZ_LR595897.1
2430513
2430529
ACGGCG
16
-
2
TCGCCG
UKMR15_RS27355
2430078
2430932
+
Genic
-435
NZ_LR595897.1
2430720
2430732
AGCCCG
12
+
2
CGAGCC
UKMR15_RS27355
2430078
2430932
+
Genic
-642
NZ_LR595897.1
2432204
2432216
ACGCGC
12
+
2
GCGCAC
UKMR15_RS27365
2431674
2432705
+
Genic
-530
NZ_LR595897.1
2432746
2432758
CCCG
12
-
3
GCGG
UKMR15_RS27370
2432772
2433374
-
Intergenic
14
NZ_LR595897.1
2433596
2433610
ACCTCG
14
+
2
CGACCT
UKMR15_RS27375
2433412
2433825
-
Genic
-184
NZ_LR595897.1
2435017
2435029
CCCGCG
12
+
2
CCGCGC
UKMR15_RS27385
2434912
2435805
-
Genic
-105
NZ_LR595897.1
2437741
2437756
ACGGCG
15
-
2
CCGTCG
UKMR15_RS27400
2437600
2438283
-
Genic
-141
NZ_LR595897.1
2437889
2437901
AACGCG
12
-
2
TCGCGT
UKMR15_RS27400
2437600
2438283
-
Genic
-289
NZ_LR595897.1
2439327
2439339
AAGATG
12
+
2
TGAAGA
UKMR15_RS27410
2439092
2439997
-
Genic
-235
NZ_LR595897.1
2439413
2439425
ACGACT
12
-
2
TCGTAG
UKMR15_RS27410
2439092
2439997
-
Genic
-321
NZ_LR595897.1
2442778
2442790
CCGCG
12
-
2
GCGCG
UKMR15_RS27425
2443176
2443541
-
Intergenic
386
NZ_LR595897.1
2442944
2442958
AGCCGC
14
-
2
CGGCTG
UKMR15_RS27425
2443176
2443541
-
Intergenic
218
NZ_LR595897.1
2443192
2443204
AGCCGC
12
+
2
GCCGCA
UKMR15_RS27425
2443176
2443541
-
Genic
-16