Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 9501 to 9525 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
2354451
2354463
ACGAGC
12
-
2
GCTCGT
UKMR15_RS27000
2353640
2355169
+
Genic
-811
NZ_LR595897.1
2355279
2355291
ACGCAG
12
-
2
TGCGTC
UKMR15_RS27005
2355276
2356310
-
Genic
-3
NZ_LR595897.1
2355723
2355735
AGCGGC
12
-
2
CGCTGC
UKMR15_RS27005
2355276
2356310
-
Genic
-447
NZ_LR595897.1
2356681
2356693
ACCGAG
12
-
2
CGGTCT
UKMR15_RS27010
2356314
2357408
-
Genic
-367
NZ_LR595897.1
2359113
2359125
ACGCGG
12
-
2
CCGCGT
UKMR15_RS27015
2357732
2359981
-
Genic
-1381
NZ_LR595897.1
2359822
2359834
ACGGCC
12
-
2
GCCGTG
UKMR15_RS27015
2357732
2359981
-
Genic
-2090
NZ_LR595897.1
2360570
2360582
ACGCGC
12
+
2
CGCGCA
UKMR15_RS27025
2360625
2361161
-
Intergenic
43
NZ_LR595897.1
2362034
2362046
CCCGCG
12
+
2
CGCGCC
UKMR15_RS27030
2361430
2362065
+
Genic
-604
NZ_LR595897.1
2363100
2363112
ACATG
12
-
2
CATGT
UKMR15_RS27035
2362197
2363228
-
Genic
-903
NZ_LR595897.1
2363736
2363749
CCGG
13
+
3
GGCC
UKMR15_RS27040
2363241
2363603
-
Intergenic
-495
NZ_LR595897.1
2364061
2364074
CCGCGG
13
+
2
CGGCCG
UKMR15_RS27045
2363997
2364329
-
Genic
-64
NZ_LR595897.1
2364678
2364690
ACGGGC
12
+
2
GGCACG
gndA
2364528
2365943
-
Genic
-150
NZ_LR595897.1
2366633
2366645
CCGCG
12
+
2
CGCGC
UKMR15_RS27060
2366399
2367076
-
Genic
-234
NZ_LR595897.1
2366745
2366757
AGCGCG
12
+
2
CGAGCG
UKMR15_RS27060
2366399
2367076
-
Genic
-346
NZ_LR595897.1
2367261
2367273
ACGCCG
12
-
2
GCGTCG
UKMR15_RS27065
2367039
2367971
-
Genic
-222
NZ_LR595897.1
2367917
2367929
ACGGCG
12
+
2
CGGCGA
UKMR15_RS27065
2367039
2367971
-
Genic
-878
NZ_LR595897.1
2368977
2368989
ACGCCG
12
+
2
CGCCGA
UKMR15_RS27070
2367968
2369392
-
Genic
-1009
NZ_LR595897.1
2370399
2370411
ACCGG
12
+
2
CGGAC
UKMR15_RS27075
2369909
2370889
+
Genic
-490
NZ_LR595897.1
2371915
2371927
CCGCGG
12
+
2
GCCGCG
UKMR15_RS27080
2370902
2372119
+
Genic
-1013
NZ_LR595897.1
2372244
2372256
AACCAG
12
-
2
GTTCTG
UKMR15_RS27080
2370902
2372119
+
Intergenic
-1342
NZ_LR595897.1
2373301
2373313
ACG
12
-
4
TCG
rpoD
2373004
2375046
-
Genic
-297
NZ_LR595897.1
2374116
2374128
AAGTCG
12
-
2
CGACTT
rpoD
2373004
2375046
-
Genic
-1112
NZ_LR595897.1
2374758
2374770
AAACGG
12
-
2
TTCCGT
rpoD
2373004
2375046
-
Genic
-1754
NZ_LR595897.1
2375238
2375250
CCGGCG
12
+
2
CGGCGC
UKMR15_RS27095
2375105
2375443
+
Genic
-133
NZ_LR595897.1
2375661
2375673
AGCGCG
12
-
2
TCGCGC
UKMR15_RS27100
2375490
2377364
-
Genic
-171