Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1426 to 1450 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
917190
917202
CCCGCG
12
+
2
CGCGCC
UKMR15_RS04085
917246
917476
-
Intergenic
44
NZ_LR595896.1
918030
918044
CCCGCG
14
-
2
GGGCGC
UKMR15_RS04090
917471
918853
+
Genic
-559
NZ_LR595896.1
918257
918270
ACGCCG
13
+
2
CGCCGA
UKMR15_RS04090
917471
918853
+
Genic
-786
NZ_LR595896.1
918501
918513
CG
12
+
6
CG
UKMR15_RS04090
917471
918853
+
Genic
-1030
NZ_LR595896.1
918653
918665
CCGCG
12
-
2
GCGCG
UKMR15_RS04090
917471
918853
+
Genic
-1182
NZ_LR595896.1
921290
921302
ACCGCG
12
-
2
TCGCGG
UKMR15_RS04100
920063
921331
+
Genic
-1227
NZ_LR595896.1
921418
921430
ACGGCG
12
+
2
CGGCGA
UKMR15_RS04105
921430
921687
+
Genic
0
NZ_LR595896.1
922337
922352
AGCGCG
15
+
2
GCGAGC
chrA
922052
923257
-
Genic
-285
NZ_LR595896.1
922732
922745
CCCGCG
13
+
2
GCCCGC
chrA
922052
923257
-
Genic
-680
NZ_LR595896.1
922947
922959
AACGCG
12
+
2
ACGCGA
chrA
922052
923257
-
Genic
-895
NZ_LR595896.1
922961
922973
ATCGCG
12
+
2
ATCGCG
chrA
922052
923257
-
Genic
-909
NZ_LR595896.1
923060
923072
CCCGG
12
-
2
GCCGG
chrA
922052
923257
-
Genic
-1008
NZ_LR595896.1
923359
923371
CCCGCG
12
-
2
GGCGCG
chrA
922052
923257
-
Intergenic
-1307
NZ_LR595896.1
923402
923415
ATCGCG
13
+
2
TCGCGA
UKMR15_RS04115
923491
924246
-
Intergenic
76
NZ_LR595896.1
923795
923807
ACGCTG
12
-
2
TCAGCG
UKMR15_RS04115
923491
924246
-
Genic
-304
NZ_LR595896.1
924636
924648
AGCCCG
12
-
2
GGGCTC
UKMR15_RS04120
924331
924858
+
Genic
-305
NZ_LR595896.1
924858
924870
CCGCG
12
+
2
GCCGC
UKMR15_RS04120
924331
924858
+
Genic
-527
NZ_LR595896.1
924894
924907
CCCGCG
13
-
2
GGCGCG
UKMR15_RS04125
924874
925896
+
Genic
-20
NZ_LR595896.1
925321
925333
AGGCCG
12
+
2
AGGCCG
UKMR15_RS04125
924874
925896
+
Genic
-447
NZ_LR595896.1
925330
925342
CCCGCG
12
+
2
CCGCGC
UKMR15_RS04125
924874
925896
+
Genic
-456
NZ_LR595896.1
925512
925525
AGCGCG
13
-
2
CTCGCG
UKMR15_RS04125
924874
925896
+
Genic
-638
NZ_LR595896.1
932051
932063
AGCGCG
12
+
2
AGCGCG
UKMR15_RS04145
930846
931181
+
Intergenic
-1205
NZ_LR595896.1
933531
933543
AGCCGC
12
+
2
AGCCGC
UKMR15_RS04155
933222
933968
-
Genic
-309
NZ_LR595896.1
933917
933930
ACCCCG
13
-
2
GTCGGG
UKMR15_RS04155
933222
933968
-
Genic
-695
NZ_LR595896.1
934305
934317
ACGGCG
12
+
2
ACGGCG
UKMR15_RS04160
934137
934982
+
Genic
-168