Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1476 to 1500 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
950629
950642
ACCGCG
13
-
2
GTCGCG
UKMR15_RS04220
949580
950956
+
Genic
-1049
NZ_LR595896.1
951802
951814
ACGCGC
12
-
2
GTGCGC
UKMR15_RS04225
951029
951772
+
Intergenic
-773
NZ_LR595896.1
952197
952209
AGGCCG
12
-
2
CTCGGC
UKMR15_RS04230
951937
952719
+
Genic
-260
NZ_LR595896.1
953299
953311
CCGCGG
12
+
2
CGCGGC
coaBC
953318
954529
-
Intergenic
7
NZ_LR595896.1
953715
953727
ACGCGG
12
-
2
CGTCCG
coaBC
953318
954529
-
Genic
-397
NZ_LR595896.1
953859
953871
AGCGCG
12
+
2
GCGCGA
coaBC
953318
954529
-
Genic
-541
NZ_LR595896.1
954108
954121
AACGC
13
-
2
CGTTG
coaBC
953318
954529
-
Genic
-790
NZ_LR595896.1
956465
956477
AGCGCC
12
-
2
TGGCGC
ileS
955091
957928
-
Genic
-1374
NZ_LR595896.1
957263
957275
AACGCG
12
+
2
GCGAAC
ileS
955091
957928
-
Genic
-2172
NZ_LR595896.1
958020
958033
CCCGCG
13
-
2
GGCGCG
UKMR15_RS04255
958040
959032
-
Intergenic
7
NZ_LR595896.1
958556
958568
ACGCCG
12
-
2
TCGGCG
UKMR15_RS04255
958040
959032
-
Genic
-516
NZ_LR595896.1
958590
958602
AAGCCG
12
+
2
CGAAGC
UKMR15_RS04255
958040
959032
-
Genic
-550
NZ_LR595896.1
959638
959650
ATCGGC
12
-
2
CGATGC
UKMR15_RS04260
959157
959819
+
Genic
-481
NZ_LR595896.1
960471
960485
CCGCG
14
+
2
CGCGC
UKMR15_RS04265
959816
961078
+
Genic
-655
NZ_LR595896.1
960506
960521
CCCGCG
15
-
2
GCGCGG
UKMR15_RS04265
959816
961078
+
Genic
-690
NZ_LR595896.1
960527
960539
AGCGCG
12
-
2
CGCTCG
UKMR15_RS04265
959816
961078
+
Genic
-711
NZ_LR595896.1
961183
961197
AGCGCG
14
-
2
CGCTCG
UKMR15_RS04270
961090
962550
+
Genic
-93
NZ_LR595896.1
961660
961672
AGCCG
12
-
2
GGCTC
UKMR15_RS04270
961090
962550
+
Genic
-570
NZ_LR595896.1
961691
961705
AGCGCG
14
-
2
GCGCTC
UKMR15_RS04270
961090
962550
+
Genic
-601
NZ_LR595896.1
965284
965299
CCGCG
15
+
3
CGCGC
UKMR15_RS04285
965136
966020
+
Genic
-148
NZ_LR595896.1
967247
967259
ACGATG
12
-
2
ATCGTC
nadB
966212
967924
-
Genic
-1035
NZ_LR595896.1
967948
967960
ACGATG
12
-
2
TCGTCA
rpmG
967981
968148
-
Intergenic
21
NZ_LR595896.1
968620
968632
ATCCGC
12
-
2
ATGCGG
radC
968692
969528
-
Intergenic
60
NZ_LR595896.1
968664
968676
CCGCG
12
-
2
GGCGC
radC
968692
969528
-
Intergenic
16
NZ_LR595896.1
968768
968782
AGCGCG
14
+
2
CGAGCG
radC
968692
969528
-
Genic
-76