Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1451 to 1475 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
935674
935687
AACGGC
13
-
2
CCGTTG
UKMR15_RS04165
935322
936803
-
Genic
-352
NZ_LR595896.1
935832
935847
ACCGCC
15
+
2
GCCACC
UKMR15_RS04165
935322
936803
-
Genic
-510
NZ_LR595896.1
935844
935860
AACGGC
16
-
2
GCCGTT
UKMR15_RS04165
935322
936803
-
Genic
-522
NZ_LR595896.1
935885
935903
AGCGGC
18
-
3
TGCCGC
UKMR15_RS04165
935322
936803
-
Genic
-563
NZ_LR595896.1
935946
935958
CCG
12
+
4
GCC
UKMR15_RS04165
935322
936803
-
Genic
-624
NZ_LR595896.1
938696
938708
CCG
12
+
4
GCC
fusA
938526
940640
-
Genic
-170
NZ_LR595896.1
938789
938802
ACCTCG
13
+
2
CTCGAC
fusA
938526
940640
-
Genic
-263
NZ_LR595896.1
939103
939115
CCGCGG
12
+
2
GGCCGC
fusA
938526
940640
-
Genic
-577
NZ_LR595896.1
940448
940460
ACGATC
12
-
2
CGTGAT
fusA
938526
940640
-
Genic
-1922
NZ_LR595896.1
940465
940478
AGCAGG
13
-
2
GCTCCT
fusA
938526
940640
-
Genic
-1939
NZ_LR595896.1
941373
941389
AGCGCG
16
+
2
GCGAGC
UKMR15_RS04175
940938
941447
-
Genic
-435
NZ_LR595896.1
941541
941553
AAAAAC
12
+
2
CAAAAA
UKMR15_RS04180
941639
941857
-
Intergenic
86
NZ_LR595896.1
942548
942560
AGCAGG
12
+
2
GAGCAG
UKMR15_RS04185
942120
942698
-
Genic
-428
NZ_LR595896.1
943553
943565
ATCGGC
12
+
2
GGCATC
icd
942966
944225
+
Genic
-587
NZ_LR595896.1
943874
943886
AACCTG
12
+
2
CTGAAC
icd
942966
944225
+
Genic
-908
NZ_LR595896.1
943924
943938
ATCGGC
14
+
2
CGGCAT
icd
942966
944225
+
Genic
-958
NZ_LR595896.1
943984
943996
ACGGC
12
+
2
GCACG
icd
942966
944225
+
Genic
-1018
NZ_LR595896.1
945444
945460
ATCGCC
16
-
2
GATGGC
UKMR15_RS04200
944393
946003
+
Genic
-1051
NZ_LR595896.1
945529
945541
CCGCG
12
+
2
GCCGC
UKMR15_RS04200
944393
946003
+
Genic
-1136
NZ_LR595896.1
946285
946297
AAGCCG
12
+
2
GAAGCC
UKMR15_RS04205
946133
946336
-
Genic
-152
NZ_LR595896.1
946571
946583
AAAGC
12
-
2
GCTTT
UKMR15_RS04205
946133
946336
-
Intergenic
-438
NZ_LR595896.1
948983
948996
ATC
13
+
4
TCA
clpA
947180
949480
+
Genic
-1803
NZ_LR595896.1
949384
949397
ACGTCG
13
+
2
GTCGAC
clpA
947180
949480
+
Genic
-2204
NZ_LR595896.1
949465
949477
AAGTCG
12
+
2
GTCGAA
clpA
947180
949480
+
Genic
-2285
NZ_LR595896.1
949729
949741
CCCGG
12
-
2
GCCGG
UKMR15_RS04220
949580
950956
+
Genic
-149