Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1501 to 1525 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
968875
968887
AGCGCG
12
+
2
AGCGCG
radC
968692
969528
-
Genic
-183
NZ_LR595896.1
969224
969236
AGCGCG
12
+
2
GCGCGA
radC
968692
969528
-
Genic
-532
NZ_LR595896.1
969460
969472
CCGCG
12
-
2
GCGGC
radC
968692
969528
-
Genic
-768
NZ_LR595896.1
969617
969630
AGCGC
13
-
2
TGCGC
UKMR15_RS04310
969667
970122
+
Intergenic
37
NZ_LR595896.1
970240
970252
AATCGC
12
-
2
TGCGAT
ispH
970125
971105
+
Genic
-115
NZ_LR595896.1
972888
972900
CCCCGG
12
-
2
GCCGGG
UKMR15_RS04325
972751
973239
+
Genic
-137
NZ_LR595896.1
974839
974851
AGGCGC
12
-
2
CTGCGC
UKMR15_RS04335
974423
975592
+
Genic
-416
NZ_LR595896.1
975618
975631
AGCGCG
13
+
2
CGAGCG
UKMR15_RS04340
975655
976428
+
Intergenic
24
NZ_LR595896.1
976750
976762
AACGAC
12
+
2
CAACGA
UKMR15_RS04345
976428
977144
+
Genic
-322
NZ_LR595896.1
976890
976902
AAGCCG
12
+
2
CGAAGC
UKMR15_RS04345
976428
977144
+
Genic
-462
NZ_LR595896.1
976900
976912
AGC
12
-
4
GCT
UKMR15_RS04345
976428
977144
+
Genic
-472
NZ_LR595896.1
977266
977280
CCCCG
14
-
2
GGCGG
UKMR15_RS04345
976428
977144
+
Intergenic
-838
NZ_LR595896.1
977276
977292
AAGGCG
16
+
2
GGCGAA
UKMR15_RS04345
976428
977144
+
Intergenic
-848
NZ_LR595896.1
977294
977309
ACCGCC
15
-
2
GGCGGT
UKMR15_RS04350
977458
978126
+
Intergenic
149
NZ_LR595896.1
978284
978298
CCGCG
14
-
2
GGCGC
UKMR15_RS04355
978299
978757
-
Intergenic
1
NZ_LR595896.1
979764
979776
AGGCGC
12
-
2
GCCTGC
UKMR15_RS04360
978774
979958
-
Genic
-990
NZ_LR595896.1
983559
983571
CCGCG
12
-
2
GCGCG
copC
983536
983907
+
Genic
-23
NZ_LR595896.1
983722
983734
ACG
12
-
4
TCG
copC
983536
983907
+
Genic
-186
NZ_LR595896.1
984172
984186
AGCCCG
14
+
2
CGAGCC
UKMR15_RS04390
983919
984881
-
Genic
-253
NZ_LR595896.1
984633
984645
ACGCCG
12
-
2
TCGGCG
UKMR15_RS04390
983919
984881
-
Genic
-714
NZ_LR595896.1
987019
987031
CCCCGG
12
-
2
CGGGGC
UKMR15_RS04400
986101
986997
+
Intergenic
-918
NZ_LR595896.1
987054
987066
CCCCGG
12
-
2
CGGGGC
UKMR15_RS04400
986101
986997
+
Intergenic
-953
NZ_LR595896.1
987679
987692
CCCGG
13
-
2
GCCGG
UKMR15_RS04405
987251
987940
-
Genic
-428
NZ_LR595896.1
989090
989102
CCGCG
12
+
2
GCCGC
UKMR15_RS04415
988933
989715
-
Genic
-157
NZ_LR595896.1
989666
989678
AGCGCG
12
+
2
GCGCGA
UKMR15_RS04415
988933
989715
-
Genic
-733