Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 1526 to 1550 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
990460
990473
CCGCG
13
-
2
GCGCG
UKMR15_RS04420
989847
990410
+
Intergenic
-613
NZ_LR595896.1
991755
991767
AGCCCG
12
+
2
CCGAGC
UKMR15_RS04430
991530
992471
-
Genic
-225
NZ_LR595896.1
992026
992038
ATCGCG
12
+
2
TCGCGA
UKMR15_RS04430
991530
992471
-
Genic
-496
NZ_LR595896.1
993872
993884
AAGGCG
12
+
2
AAGGCG
UKMR15_RS04435
992691
994370
+
Genic
-1181
NZ_LR595896.1
993958
993970
AACGCG
12
+
2
CGCGAA
UKMR15_RS04435
992691
994370
+
Genic
-1267
NZ_LR595896.1
994308
994320
ATCGGC
12
+
2
GCATCG
UKMR15_RS04435
992691
994370
+
Genic
-1617
NZ_LR595896.1
994898
994910
CCGCG
12
+
2
CGCCG
UKMR15_RS04440
994395
994937
+
Genic
-503
NZ_LR595896.1
995177
995189
ACGGCT
12
+
2
GCTACG
UKMR15_RS04445
994934
995683
+
Genic
-243
NZ_LR595896.1
995632
995644
ACGATC
12
+
2
ATCACG
UKMR15_RS04445
994934
995683
+
Genic
-698
NZ_LR595896.1
997116
997128
ACGCG
12
+
2
CGACG
UKMR15_RS04455
996752
998068
+
Genic
-364
NZ_LR595896.1
998666
998680
CCCG
14
-
3
CGGG
cobA
998128
998901
+
Genic
-538
NZ_LR595896.1
999218
999230
CCGCG
12
-
2
GCGCG
UKMR15_RS04465
999112
999498
-
Genic
-106
NZ_LR595896.1
1000591
1000603
AAG
12
+
4
GAA
lptG
999530
1000681
-
Genic
-1061
NZ_LR595896.1
1000795
1000809
AGCCCG
14
+
2
GAGCCC
lptF
1000685
1001782
-
Genic
-110
NZ_LR595896.1
1002269
1002281
ACGGGC
12
-
2
TGCCCG
UKMR15_RS04480
1001903
1003414
+
Genic
-366
NZ_LR595896.1
1003827
1003839
ATCGCG
12
+
2
ATCGCG
UKMR15_RS04485
1003458
1003874
+
Genic
-369
NZ_LR595896.1
1004510
1004525
AGCGCG
15
-
2
TCGCGC
UKMR15_RS04495
1004772
1005095
-
Intergenic
247
NZ_LR595896.1
1005001
1005014
AGCGCG
13
+
2
GCGCGA
UKMR15_RS04495
1004772
1005095
-
Genic
-229
NZ_LR595896.1
1006576
1006588
AGCGCG
12
+
2
GCGCGA
ilvD
1005309
1006982
-
Genic
-1267
NZ_LR595896.1
1006623
1006635
ACG
12
+
4
ACG
ilvD
1005309
1006982
-
Genic
-1314
NZ_LR595896.1
1007439
1007453
AGCGCG
14
-
2
CGCTCG
UKMR15_RS04505
1007160
1008155
+
Genic
-279
NZ_LR595896.1
1008058
1008078
CCGCG
20
-
4
GCGCG
UKMR15_RS04505
1007160
1008155
+
Genic
-898
NZ_LR595896.1
1008078
1008090
AAGGCG
12
-
2
CTTCGC
UKMR15_RS04505
1007160
1008155
+
Genic
-918
NZ_LR595896.1
1009513
1009525
CCGCG
12
+
2
CGCGC
UKMR15_RS04515
1009533
1010270
-
Intergenic
8
NZ_LR595896.1
1009563
1009575
ACCGTG
12
-
2
ACGGTC
UKMR15_RS04515
1009533
1010270
-
Genic
-30